Index _ | A | B | C | D | E | F | G | H | K | L | M | N | P | Q | R | S | T | Z _ __init__() (maldibatchkit.AutoCorrector method) (maldibatchkit.BaseBatchCorrector method) (maldibatchkit.BatchAwareWarping method) (maldibatchkit.ComBat method) (maldibatchkit.diagnostics.BatchCorrectionBenchmark method) (maldibatchkit.Harmony method) (maldibatchkit.integrations.MaldiSetAdapter method) (maldibatchkit.Limma method) (maldibatchkit.NoOpCorrector method) (maldibatchkit.QualityWeightedComBat method) (maldibatchkit.ReferenceScaling method) (maldibatchkit.SpeciesAwareComBat method) (maldibatchkit.ZScorePerBatch method) A AutoCorrector (class in maldibatchkit) B BaseBatchCorrector (class in maldibatchkit) batch_average_precision_score() (in module maldibatchkit.metrics) batch_balanced_accuracy_score() (in module maldibatchkit.metrics) batch_f1_score() (in module maldibatchkit.metrics) batch_matthews_corrcoef() (in module maldibatchkit.metrics) batch_precision_score() (in module maldibatchkit.metrics) batch_recall_score() (in module maldibatchkit.metrics) batch_roc_auc_score() (in module maldibatchkit.metrics) BatchAwareWarping (class in maldibatchkit) BatchCorrectionBenchmark (class in maldibatchkit.diagnostics) C ComBat (class in maldibatchkit) correct() (maldibatchkit.integrations.MaldiSetAdapter method) D diagnostic_report() (in module maldibatchkit.diagnostics) E extract() (maldibatchkit.integrations.MaldiSetAdapter method) F fit() (maldibatchkit.BaseBatchCorrector method) (maldibatchkit.ComBat method) (maldibatchkit.diagnostics.BatchCorrectionBenchmark method) G get_feature_names_out() (maldibatchkit.BaseBatchCorrector method) (maldibatchkit.ComBat method) H Harmony (class in maldibatchkit) K kbet() (in module maldibatchkit.diagnostics) L Limma (class in maldibatchkit) lisi() (in module maldibatchkit.diagnostics) M make_batch_scorer() (in module maldibatchkit.metrics) MaldiSetAdapter (class in maldibatchkit.integrations) MedianCentering (class in maldibatchkit) N NoOpCorrector (class in maldibatchkit) P peak_position_drift() (in module maldibatchkit.diagnostics) per_batch_spectrum_count() (in module maldibatchkit.diagnostics) plot() (maldibatchkit.diagnostics.BatchCorrectionBenchmark method) plot_batch_umap() (in module maldibatchkit.viz) plot_diagnostic_summary() (in module maldibatchkit.viz) plot_peak_shift() (in module maldibatchkit.viz) Q QualityWeightedComBat (class in maldibatchkit) R rank() (maldibatchkit.diagnostics.BatchCorrectionBenchmark method) ReferenceScaling (class in maldibatchkit) S silhouette_batch() (in module maldibatchkit.diagnostics) SpeciesAwareComBat (class in maldibatchkit) T tic_cov_per_batch() (in module maldibatchkit.diagnostics) to_dataframe() (maldibatchkit.diagnostics.BatchCorrectionBenchmark method) transform() (maldibatchkit.BaseBatchCorrector method) (maldibatchkit.ComBat method) Z ZScorePerBatch (class in maldibatchkit)
